- A-Bomb
- AIM
- A Deeper Look at Characters That Are Mentioned Only in MUA3
- A Deeper Look at the Characters that are Mentioned In MUA1
- Absorbing Man
- Act 1
- Agents of S.H.I.E.L.D.
- Agile Warriors
- Air Force
- Alpha Primitives
- Alternate Identities
- Ancient One
- Annihilus
- Anti-Reg
- Anti-Registration
- Arcade
- Arcade Bot
- Arch Rivals
- Asgard
- Asgardians
- Assassins
- Attilan
- Attuma
- Avengers
- Bad to the Bone
- Balder Odinson
- Baron Mordo
- Barracks
- Beast
- Beroge
- Beta Ray Bill
- Black Bolt
- Black Dwarf
- Black Panther
- Black Widow
- Blackheart
- Blade
- Bravo Team
- Bruisers
- Bulldozer
- Bullseye
- Cable
- Captain America
- Captain Britain
- Captain Marvel
- Captain Marvel (Mar-Vell)
- Carnage
- Carol Danvers
- Castle Doom
- Celestial
- Character & Sim Mission Pack
- Cheat Codes
- Cheats in Marvel: Ultimate Alliance
- Civil War
- Classic Avengers
- Classic Captain America
- Cloak
- Colossus
- Command Deck
- Corsair
- Corvus Glaive
- Cosmo
- Costumes
- Crimson Dynamo
- Crystal
- Cull Obsidian
- Curse of the Vampire
- Cyclops
- Dagger
- Daredevil
- Dark Captain America
- Dark Cyclops
- Dark Dimension
- Dark Elf
- Dark Fantastic Four
- Dark Past
- Dark Psylocke
- Dark Spider-Man
- Dark Thor
- Dark Thug
- Dark X-Force
- Deadpool
- Deathbird
- Defenders
- Destroyer
- Diamondback
- Doctor Doom
- Doctor Octopus
- Doctor Strange
- Doombots
- Dora Milaje
- Dormammu
- Dormmammu
- Double Date
- Drax
- Dum Dum Dugan
- Earth-6109
- Ebony Maw
- Edwin Jarvis
- Electro
- Elektra Natchios
- Elsa Bloodstone
- Enchantress
- Equinox
- Executioner
- Falcon
- Fantastic Four
- Femme Fatale
- Fin Fang Foom
- Fire Demons
- Fire Giant
- Firestar
- Flashback
- Flight Deck
- Forge
- Freaks
- Friendly Rivalry
- Frost Giant
- Galactus
- Gambit
- Gamora Zen Whoberi Ben Titan
- Gauntlet Mode
- Ghost Rider
- Gladiator
- Glitches
- Gold Edition
- Goliath
- Gorgon
- Green Goblin
- Grey Gargoyle
- Grim Reaper
- Groot
- Groot & Rocket Raccoon
- Guardians of the Galaxy
- Hank Pym
- Havok
- Hawkeye
- Hawkeye (Clint Barton)
- Heart of Infinity
- Heimdall
- Hela
- Heroes Pack
- Heroes Pack DLC
- Hobgoblin
- Hulk
- Human Torch
- Hussar
- Hydra
- Iceman
- Infinity Sentinel
- Insectoids
- Invisible Woman
- Iron Fist
- Iron Man
- Jack O'Lantern
- Jean Grey
- Jessica Jones
- Juggernaut
- Justice
- Karnak
- Kingpin
- Klaw
- Knowhere
- Kraken
- Kree
- Kurse
- Lady Deathstrike
- Latveria
- Lilandra Neramani
- Lizard
- Lockjaw
- Loki Laufeyson
- Loki Troll
- Lucas Bishop
- Lucia von Bardas
- Luke Cage
- MODOK
- Magneto
- Man-Ape
- Maria Hill
- Martial Artists
- Marvel: Ultimate Alliance
- Marvel: Ultimate Alliance/Cut Contents
- Marvel: Ultimate Alliance/Gold Edition
- Marvel: Ultimate Alliance/Story
- Marvel: Ultimate Alliance - Conversations
- Marvel: Ultimate Alliance 2
- Marvel: Ultimate Alliance 2/Story
- Marvel: Ultimate Alliance 3
- Marvel: Ultimate Alliance Wiki
- Marvel: Ultimate Alliance Wiki:About
- Marvel: Ultimate Alliance Wiki:Manual of Style
- Marvel: Ultimate Alliance Wiki:Manual of Style/Sample
- Marvel: Ultimate Alliance Wiki:Polls
- Marvel: Ultimate Alliance Wiki:Staff
- Marvel Knights
- Marvel Royalty
- Masters of Evil
- Maximus Boltagon
- Medusa
- Melee Combos
- Mephisto
- Mesphielhim
- Met His Maker
- Michael Morbius
- Mindless Ones
- Mister Fantastic
- Molten Man
- Moon Knight
- Moonstone
- Ms. Marvel
- Ms. Marvel (Kamala Khan)
- Multiple Man
- Murderworld
- Mysterio
- Mystique
- N-Space
- Namor McKenzie
- Namorita Prentiss
- Nanite Nick Fury
- Natural Forces
- Natural Leaders
- Nebula
- Negative Zone
- New Avengers
- New Fantastic Four
- New Warriors
- Nick Fury
- Nick Fury Jr.
- Nick Fury Sr.
- Nightcrawler
- Nitro
- Nova (Richard Rider)
- Nova Corps
- Odin Borson
- Officer Swanson
- Omega Base
- Outriders
- Paibok
- Patriot
- Penance
- Phantom Rider
- Piledriver
- Pinball
- Power Platoon
- Powers
- Primary Lift
- Pro-Reg Heroes
- Pro-Registration
- Prodigy
- Professor X
- Proxima Midnight
- Psylocke
- Punisher
- Quicksilver
- Radioactive Man
- Raft Prisoners
- Raven Ultimates
- Red Hulk
- Red Skull
- Rhino
- Rise of the Phoenix
- Rocket Raccoon
- Rogues Gallery
- Ronan
- Ronin
- Ronin (Maya Lopez)
- S.H.I.E.L.D.
- SHIELD Helicarrier
- Sabretooth
- Sanctum Sanctorum
- Sandman
- Savage Entertainment
- Scarlet Witch
- Scorcher
- Scorchers
- Scorpion
- Scott Lang
- Secret Avengers
- Secret Defenders
- Senator Kelly
- Sentinels
- Sentry
- Shaba Ultimates
- Shadow of Doom
- Shadowkahn
- She-Hulk
- Shocker
- Shut Up Already!
- Sif
- Silver Surfer
- Sinister Six
- Skrull Empress
- Songbird
- Speedball
- Spider-Gwen
- Spider-Man
- Spider-Man (Miles Morales)
- Spider-Man (Peter Parker)
- Spider-Man 2099
- Spider-Woman
- Spider-Woman (Jessica Drew)
- Stan Lee
- Star-Lord
- Starbolt
- Stark Tower
- Storm
- Super Natural
- Super Skrull
- Super Soldier Serum
- Supergiant
- Superhuman Registration Act
- Surtur
- Symbiotes
- Thane
- Thanos
- The Black Order
- The Black Order Expansion Pass
- The Fold
- The Hand
- The Mandarin
- The Raft
- The Thing
- The Ultimate Alliance
- Think Tanks
- Thor Odinson
- Thunderball
- Thunderbolts
- Tiger Shark
- Tinkerer
- Titanium Man
- Triton
- Tyr Odinson
- Uatu
- Ulik
- Ultimo
- Ultron
- Ultron Drones
- Upper Batteries
- Valkyrie
- Vengeance
- Venom
- Vicarious Visions
- Viking Souls
- Villains Pack
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